Mercurial > repos > devteam > picard

comparison picard_MarkDuplicatesWithMateCigar.xml @ 32:f9242e01365a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
author iuc
date Mon, 25 Sep 2023 08:32:17 +0000
parents 585027e65f3b
children 3f254c5ced1d
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31:585027e65f3b 32:f9242e01365a
32 32
33 BLOCK_SIZE=100000 33 BLOCK_SIZE=100000
34 VALIDATION_STRINGENCY="${validation_stringency}" 34 VALIDATION_STRINGENCY="${validation_stringency}"
35 QUIET=true 35 QUIET=true
36 VERBOSITY=ERROR 36 VERBOSITY=ERROR
37 @TMPDIR_OPTION@
38 37
39 ]]></command> 38 ]]></command>
40 <inputs> 39 <inputs>
41 <param format="bam" name="inputFile" type="data" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/> 40 <param format="bam" name="inputFile" type="data" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/>
42 <param name="comment" type="text" label="Add this comment to BAM dataset"/> 41 <param name="comment" type="text" label="Add this comment to BAM dataset"/>