Mercurial > repos > devteam > picard
diff test-data/picard_QualityScoreDistribution_test1.tab @ 19:5053a18d9bc8 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 7036343b9ac0a0ffc2ce4f6db465b9298ef05e73
| author | iuc |
|---|---|
| date | Mon, 16 Apr 2018 21:27:29 -0400 |
| parents | 3d4f1fa26f0e |
| children | 3f254c5ced1d |
line wrap: on
line diff
--- a/test-data/picard_QualityScoreDistribution_test1.tab Sat Jan 20 08:28:24 2018 -0500 +++ b/test-data/picard_QualityScoreDistribution_test1.tab Mon Apr 16 21:27:29 2018 -0400 @@ -1,7 +1,7 @@ ## htsjdk.samtools.metrics.StringHeader -# picard.analysis.QualityScoreDistribution CHART_OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_968.dat ALIGNED_READS_ONLY=false PF_READS_ONLY=false INCLUDE_NO_CALLS=false INPUT=/Users/anton/galaxy-central/database/files/000/dataset_966.dat OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_967.dat REFERENCE_SEQUENCE=localref.fa ASSUME_SORTED=true VERBOSITY=ERROR QUIET=true VALIDATION_STRINGENCY=LENIENT STOP_AFTER=0 COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false +# QualityScoreDistribution CHART_OUTPUT=/tmp/tmpYRm8q4/files/000/dataset_85.dat ALIGNED_READS_ONLY=false PF_READS_ONLY=false INCLUDE_NO_CALLS=false INPUT=picard_QualityScoreDistribution_bam OUTPUT=/tmp/tmpYRm8q4/files/000/dataset_84.dat ASSUME_SORTED=true VERBOSITY=ERROR QUIET=true VALIDATION_STRINGENCY=LENIENT REFERENCE_SEQUENCE=localref.fa STOP_AFTER=0 COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false GA4GH_CLIENT_SECRETS=client_secrets.json USE_JDK_DEFLATER=false USE_JDK_INFLATER=false ## htsjdk.samtools.metrics.StringHeader -# Started on: Wed Oct 15 14:31:45 EDT 2014 +# Started on: Sat Apr 14 09:35:07 CEST 2018 ## HISTOGRAM java.lang.Byte