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diff picard_SamToFastq.xml @ 28:881d7645d1bf draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 92e89c89178482870c14cf15f38fbfd4470aa130"
author iuc
date Sat, 15 Jan 2022 12:39:30 +0000
parents 9ffcddf6f9c0
children 585027e65f3b
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line diff
--- a/picard_SamToFastq.xml	Wed Feb 19 14:27:00 2020 -0500
+++ b/picard_SamToFastq.xml	Sat Jan 15 12:39:30 2022 +0000
@@ -1,11 +1,14 @@
 <tool name="SamToFastq" id="picard_SamToFastq" version="@TOOL_VERSION@.@WRAPPER_VERSION@">
-  <description>extract reads and qualities from SAM/BAM dataset and convert to fastq</description>
-  <macros>
-    <import>picard_macros.xml</import>
-    <token name="@WRAPPER_VERSION@">2</token>
-  </macros>
-  <expand macro="requirements" />
-  <command detect_errors="exit_code"><![CDATA[
+    <description>extract reads and qualities from SAM/BAM dataset and convert to fastq</description>
+    <macros>
+        <import>picard_macros.xml</import>
+        <token name="@WRAPPER_VERSION@">2</token>
+    </macros>
+    <xrefs>
+        <xref type="bio.tools">picard_samtofastq</xref>
+    </xrefs>
+    <expand macro="requirements" />
+    <command detect_errors="exit_code"><![CDATA[
 
     @java_options@
     @symlink_element_identifier@