# HG changeset patch
# User iuc
# Date 1564404493 14400
# Node ID db17d5321badf6e6fc8894920c5ce19dba6c6ffc
# Parent  4e404acfafa6b753af87680268d74455f8648639
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_flagstat commit ca0d1d44099fd21e0f8214102f4d8a2fd2d054d6

diff -r 4e404acfafa6 -r db17d5321bad samtools_flagstat.xml
--- a/samtools_flagstat.xml	Thu Sep 27 09:01:18 2018 -0400
+++ b/samtools_flagstat.xml	Mon Jul 29 08:48:13 2019 -0400
@@ -9,7 +9,8 @@
     <expand macro="version_command"/>
 
     <command><![CDATA[
-        samtools flagstat '$input1' > '$output1'
+    @ADDTHREADS@
+    samtools flagstat -@ \$addthreads '$input1' > '$output1'
     ]]></command>
 
     <inputs>