Mercurial > repos > fcaramia > contra
comparison contra.xml @ 25:c361b3fb806e
added Nicola Path 2.0
| author | Franco Caramia <franco.caramia@petermac.org> |
|---|---|
| date | Tue, 03 Jun 2014 17:31:28 +1000 |
| parents | 2770f49cb0dc |
| children |
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| 24:6bcf47cc272a | 25:c361b3fb806e |
|---|---|
| 1 <tool id="contra_tool" name="Contra Copy number analysis" version="1.0.0"> | 1 <tool id="contra_tool" name="Contra Copy number analysis" version="1.0.0"> |
| 2 <description>: Copy Number Analysis for Targeted Resequencing</description> | 2 <description>: Copy Number Analysis for Targeted Resequencing</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="2.17.0">bedtools</requirement> | 4 <requirement type="package" version="2.17.0">bedtools</requirement> |
| 5 <requirement type="package" name="samtools" version="0.1.18">samtools</requirement> | 5 <requirement type="package" version="0.1.18">samtools</requirement> |
| 6 <requirement type="package" name="contra" version="2.0.4">contra</requirement> | 6 <requirement type="package" version="3.0.3">R</requirement> |
| 7 <requirement type="package" version="2.0.4">contra</requirement> | |
| 8 | |
| 7 </requirements> | 9 </requirements> |
| 8 <command interpreter="perl"> | 10 <command interpreter="perl"> |
| 9 | 11 |
| 10 contra_wrapper.pl | 12 contra_wrapper.pl |
| 11 | 13 |