Mercurial > repos > peterjc > fastq_filter_by_id

comparison tools/fastq/fastq_filter_by_id.txt @ 2:d570cc324779

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Migrated tool version 0.0.4 from old tool shed archive to new tool shed repository
author peterjc
date Tue, 07 Jun 2011 17:24:08 -0400
parents 10e963c79a45
children
comparison
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1:b79caa511ba2 2:d570cc324779
1 Obsolete
2 ========
3
4 This tool is now obsolete, having been replaced by a more general version
5 covering the FASTA, FASTQ and SFF sequence formats in a single tool. You
6 should only install this tool if you need to support existing workflows
7 which used it.
8
1 Galaxy tool to filter FASTQ sequences by ID 9 Galaxy tool to filter FASTQ sequences by ID
2 =========================================== 10 ===========================================
3 11
4 This tool is copyright 2010 by Peter Cock, SCRI, UK. All rights reserved. 12 This tool is copyright 2010 by Peter Cock, SCRI, UK. All rights reserved.
5 See the licence text below. 13 See the licence text below.
31 ======= 39 =======
32 40
33 v0.0.1 - Initial verion (not publicly released) 41 v0.0.1 - Initial verion (not publicly released)
34 v0.0.2 - Allow both, just pos or just neg output files 42 v0.0.2 - Allow both, just pos or just neg output files
35 - Preserve the FASTQ variant in the XML wrapper 43 - Preserve the FASTQ variant in the XML wrapper
44 v0.0.3 - Fixed bug when generating non-matching FASTQ file only
45 v0.0.4 - Deprecated, marked as hidden in the XML
36 46
37 47
38 Developers 48 Developers
39 ========== 49 ==========
40 50
41 This script and similar versions for FASTA and SFF files are currently being 51 This script and related tools are being developed on the following hg branch:
42 developed on the following hg branch: 52 http://bitbucket.org/peterjc/galaxy-central/src/tools
53
54 This incorporates the previously used hg branch:
43 http://bitbucket.org/peterjc/galaxy-central/src/fasta_filter 55 http://bitbucket.org/peterjc/galaxy-central/src/fasta_filter
44 56
45 For making the "Galaxy Tool Shed" http://community.g2.bx.psu.edu/ tarball use 57 For making the "Galaxy Tool Shed" http://community.g2.bx.psu.edu/ tarball use
46 the following command from the Galaxy root folder: 58 the following command from the Galaxy root folder:
47 59