Mercurial > repos > peterjc > get_orfs_or_cdss

comparison test-data/get_orf_input.t1_nuc_out.fasta @ 1:922d69bd5258 draft

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Uploaded v0.0.2, fixes labelling issue on reverse strand.
author peterjc
date Tue, 29 Jan 2013 10:19:01 -0500
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0:9cff9a1176ea 1:922d69bd5258
1 >alpha|CDS1 length 87 aa, 264 bp, from 68..331 of alpha three forward CDS using table 1
2 ATGNATGNATGNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAA
3 AAAAAAAAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
4 CCCCCCCCCCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
5 GGGGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTN
6 NNNNNNNNNNNNNNNNTAANNTAG
7 >alpha|CDS2 length 84 aa, 255 bp, from 72..326 of alpha three forward CDS using table 1
8 ATGNATGNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
9 AAAAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10 CCCCCCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
11 GGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNN
12 NNNNNNNNNNNNTAA
13 >alpha|CDS3 length 86 aa, 261 bp, from 76..336 of alpha three forward CDS using table 1
14 ATGNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
15 AAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
16 CCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
17 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNN
18 NNNNNNNNTAANNTAGMNTGA