Mercurial > repos > peterjc > mira_assembler
comparison tools/sr_assembly/mira.txt @ 6:3e7eca1f5d04 draft
MIRA wrapper v0.0.5 with <version_command> support and check for MIRA V3.4
| author | peterjc |
|---|---|
| date | Fri, 01 Feb 2013 10:34:21 -0500 |
| parents | 216bf640baaf |
| children | 4d3f94dfb857 |
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| 5:216bf640baaf | 6:3e7eca1f5d04 |
|---|---|
| 39 (some other switches changed, e.g. -OUT rrol to rrot, which | 39 (some other switches changed, e.g. -OUT rrol to rrot, which |
| 40 means the wrapper no longer works with MIRA 3.2.x) | 40 means the wrapper no longer works with MIRA 3.2.x) |
| 41 - The contig summary file (TCS file) was removed in MIRA 3.4 | 41 - The contig summary file (TCS file) was removed in MIRA 3.4 |
| 42 - Report all missing output files (not just first missing one) | 42 - Report all missing output files (not just first missing one) |
| 43 v0.0.4 - Fix problem with backbone arguments inroduced in v0.0.3 | 43 v0.0.4 - Fix problem with backbone arguments inroduced in v0.0.3 |
| 44 v0.0.5 - Implement the <version_command> tag to record the wrapper | |
| 45 version and the MIRA version being used. | |
| 46 - Check using MIRA 3.4 (later versions have a different API) | |
| 44 | 47 |
| 45 | 48 |
| 46 Developers | 49 Developers |
| 47 ========== | 50 ========== |
| 48 | 51 |