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beautifyfasta (version 1.0.0)

Input File:

fasta file to convert

Convert Pipes:

Convert pipe symbols in fasta sequence id to space.

Convert gi|:

Converts instances of gi| to gi_.

Convert slash \ :

Converts instances of \ to _.

Add a unique number:

Sequentially add a unique number to beginning of each sequence.

Add a unique number:

Add a space after the unique number.

Input a fasta file. beautifyfasta will convert interleaved fasta to non-interleaved (full sequence on one line). In addition, you can choose to convert symbols from the fasta id. The fasta id is the descriptor from the > to the first space. The fasta description (first line after any space) is not changed.