Galaxy |

raxml (version 7.2.8)

Raxml Phylip File:

Outgroup (optional):

The name of one or more (comma-separated) outgroup(s) can be specified

Gamma model of rate heterogeneity:

If not checked, CAT model will be used.

Estimate proportion of invariant sites:

Protein Sequences:

If not checked, DNA sequences will be assumed

Protein Model:

Multi-state morphological char model:

Ignored unless specifying MULTI in model partition

Specify Number of bootstrap replicates:

100 tends to be sufficient, do not exceed 1000

Random Number Seed:

Partition file:

You may provide an alignment partition file.

BINARY Constraint Tree:

This option allows you to specify an incomplete or comprehensive multifurcating constraint tree in NEWICK format.

Maximum Likelihood Search:

Will search for best scoring tree after the bootstraps.

Run Name:

For Galaxy History