Galaxy tool preview

runMapping cDNA (version 1.0.1)
Unpaired Reads Sff Files
Unpaired Reads Sff Files 0
Unpaired Reads Fasta/Fastq Files
Unpaired Reads Fasta/Fastq Files 0
Paired Reads Sff Files
Paired Reads Sff Files 0
Paired Reads Fasta/Fastq Files
Paired Reads Fasta/Fastq Files 0
Reference Sequences
Reference Sequence 0

What it does

Map (Roche/454) reads to a reference using Newbler.

Download the manual here: http://galaxy.jgi-psf.org/static/manuals/GSFLXSystemSoftwareManual_PartC_Assembler-Mapper-SFFTools.pdf

Fasta Header Format Fasta input must provide any pairing information in the header using the expected key=value format. Use the 'Sanger tab to Newbler Fasta' tool.