Previous changeset 1:6556e7ae784e (2016-07-13) Next changeset 3:a01eacacfd88 (2017-01-31) |
Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 44bebb8a97d64015cbba59f0663e2541035112b6 |
modified:
bcftools_norm.xml macros.xml |
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diff -r 6556e7ae784e -r d110fb275304 bcftools_norm.xml --- a/bcftools_norm.xml Wed Jul 13 10:57:45 2016 -0400 +++ b/bcftools_norm.xml Mon Oct 03 12:16:45 2016 -0400 |
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@@ -1,5 +1,5 @@ <?xml version='1.0' encoding='utf-8'?> -<tool name="bcftools @EXECUTABLE@" id="bcftools_@EXECUTABLE@" version="@VERSION@.0"> +<tool name="bcftools @EXECUTABLE@" id="bcftools_@EXECUTABLE@" version="@VERSION@.1"> <description>Left-align and normalize indels; check if REF alleles match the reference; split multiallelic sites into multiple rows; recover multiallelics from multiple rows</description> <macros> <token name="@EXECUTABLE@">norm</token> @@ -94,7 +94,7 @@ </param> <param name="strict_filter" type="boolean" truevalue="--strict-filter" falsevalue="" label="Strict Filter" help="When merging (-m+), merged site is PASS only if all sites being merged PASS" /> - <param name="site_win" type="integer" label="Site Window" default="1000" optional="True" + <param name="site_win" type="integer" label="Site Window" value="1000" optional="True" help="(-w, --site-win) Buffer for sorting lines which changed position during realignment" /> </section> |
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diff -r 6556e7ae784e -r d110fb275304 macros.xml --- a/macros.xml Wed Jul 13 10:57:45 2016 -0400 +++ b/macros.xml Mon Oct 03 12:16:45 2016 -0400 |
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@@ -339,7 +339,6 @@ </when> <when value="targets_file"> <expand macro="macro_targets_file"> - <optional>true</optional> </expand> </when> </conditional> |