Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository roche454_toolsuite
Name: roche454_toolsuite
Owner: edward-kirton
Synopsis: This suite contains Roche/454's Newbler and sff-fastq converter
Roche/454 Newbler assembler and mapper, sfffile utility, and sff:fastq converter.
Link to this repository: https://toolshed.g2.bx.psu.edu/view/edward-kirton/roche454_toolsuite/bf1f8bc4abe6
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/edward-kirton/roche454_toolsuite
Type: unrestricted
Revision: 3:bf1f8bc4abe6
This revision can be installed: True
Times cloned / installed: 768

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
1.0.0 any
Select reads to include or exclude from one or more input Sff files 1.0.0 any
De novo assembly of Roche/454 reads using Newbler 1.0.1 any
De novo assembly of Roche/454 cDNA reads using Newbler 1.0.1 any
Map Roche/454 reads to a reference using Newbler 1.0.1 any
Map Roche/454 reads to a reference using Newbler 1.0.1 any

Categories
Assembly - Tools for working with assemblies