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Repository vcfdistance
Name: vcfdistance
Owner: anton
Synopsis: Calculate distance to the nearest variant.
Adds a value to each VCF record indicating the distance to the nearest variant in the file.     The dataset used as input to this tool must be coordinate sorted. This can be achieved by either using the VCFsort utility or Galaxy's general purpose sort tool (in this case sort on the first and the second column in ascending order). 
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/anton/vcfdistance/de3bbf60d086
Type: unrestricted
Revision: 0:de3bbf60d086
This revision can be installed: True
Times cloned / installed: 222
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Repository package_vcflib revision 7949cc09120a owned by anton

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Name Version Type
vcflib 586c5ae5d57a38dae6b32ea831fb1f7cfa14c9bd package

Contents of this repository

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Name Description Version Minimum Galaxy Version
Calculate distance to the nearest variant 0.0.1 any

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis