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Repository instrain_profile
Name: instrain_profile
Owner: iuc
Synopsis: Wrapper for the humann tool suite: InStrain Profile
inStrain is python program for analysis of co-occurring genome populations from
metagenomes that allows highly accurate genome comparisons, analysis of coverage,
microdiversity, and linkage, and sensitive SNP detection with gene localization and
synonymous non-synonymous identification.
Content homepage: https://instrain.readthedocs.io/en/latest/#
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/instrain
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/instrain_profile/4b0418b1f58b
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/instrain_profile
Type: unrestricted
Revision: 1:4b0418b1f58b
This revision can be installed: True
Times cloned / installed: 211

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Creates an inStrain profile (microdiversity analysis) from a mapping file 1.5.3+galaxy0 20.01

Categories
Metagenomics - Tools enabling the study of metagenomes