Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository vcfannotategenotypes
Name: vcfannotategenotypes
Owner: devteam
Synopsis: Annotate genotypes in a VCF dataset using genotypes from another VCF dataset.
Annotates genotypes in the first file with genotypes in the second
adding the genotype as another flag to each sample filed in the first file. Annotation-tag
is the name of the sample flag which is added to store the annotation.  also adds
a ''has\_variant'' flag for sites where the second file has a variant.
Content homepage: https://github.com/ekg/vcflib
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcfannotategenotypes
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/devteam/vcfannotategenotypes/ad57b4feaf87
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/vcfannotategenotypes
Type: unrestricted
Revision: 1:ad57b4feaf87
This revision can be installed: True
Times cloned / installed: 3048
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_vcflib_8a5602bf07 revision 7e67466b033e owned by iuc

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
vcflib 8a5602bf07 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Annotate genotypes in a VCF dataset using genotypes from another VCF dataset 0.0.3 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA