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Repository mqppep_preproc
Name: mqppep_preproc
Owner: galaxyp
Synopsis: Wrapper for the mqppep suite tool: MaxQuant Phosphopeptide Preprocessing
Phosphoproteomic Enrichment Pipeline provides tools two tools for processing MaxQuant data for phosphoproteome-enriched samples.

"MaxQuant Phosphopeptide Preprocessing" (mqppep_preproc) transforms the 'Phospho (STY)Sites.txt' output file that MaxQuant produces for for phosphoproteome-enriched samples to prepare it for ANOVA.

"MaxQuant Phosphopeptide ANOVA" (mqppep_anova) performs ANOVA on the preprocessed data.
Content homepage: https://github.com/galaxyproteomics/tools-galaxyp/
Development repository: https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/galaxyp/mqppep_preproc/5c2beb4eb41c
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/mqppep_preproc
Type: unrestricted
Revision: 4:5c2beb4eb41c
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Times cloned / installed: 61

Contents of this repository

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Name Description Version Minimum Galaxy Version
Prep phosphoproteomic MaxQuant output for statistical anlaysis. 0.1.18+galaxy0 21.05

Categories
Proteomics - Tools enabling the study of proteins