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Repository kraken
Name: kraken
Owner: devteam
Synopsis: Kraken for taxonomic designation.
Kraken is a system for assigning taxonomic labels to short DNA
sequences, usually obtained through metagenomic studies. Previous attempts by other
bioinformatics software to accomplish this task have often used sequence alignment
or machine learning techniques that were quite slow, leading to the development
of less sensitive but much faster abundance estimation programs. Kraken aims to
achieve high sensitivity and high speed by utilizing exact alignments of k-mers
and a novel classification algorithm.
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/kraken
Type: unrestricted
Revision: 2:642f30185af2
This revision can be installed: True
Times cloned / installed: 3660
Dependencies of this repository

Repository package_kraken_0_10_5 revision 89a36b0f718c owned by iuc

Name Version Type
kraken 0.10.5 package

Contents of this repository

Name Description Version Minimum Galaxy Version
assign taxonomic labels to sequencing reads 1.1.2 any

Categories
Metagenomics - Tools enabling the study of metagenomes