Repository piranha
Name: piranha
Owner: rnateam
Synopsis: Piranha is a peak-caller for CLIP- and RIP-Seq data
Piranha is a peak-caller for CLIP- and RIP-Seq data. It takes input in BED or BAM format and identifies regions of statistically significant read enrichment.
Additional covariates may optionally be provided to further inform the peak-calling process. 

http://smithlabresearch.org/software/piranha/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/piranha
Link to this repository: https://toolshed.g2.bx.psu.edu/view/rnateam/piranha/f7f366ede872
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/rnateam/piranha
Type: unrestricted
Revision: 0:f7f366ede872
This revision can be installed: True
Times cloned / installed: 1658

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
peak-caller for CLIP- and RIP-Seq data 0.1.0 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
RNA - Utilities for RNA