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Repository maker
Name: maker
Owner: iuc
Synopsis: Maker tool from the maker package
MAKER is a portable and easily configurable genome annotation pipeline.
Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databases.
Content homepage: http://www.yandell-lab.org/software/maker.html
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/maker
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/maker/370c210d9541
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/maker
Type: unrestricted
Revision: 10:370c210d9541
This revision can be installed: True
Times cloned / installed: 931

Repository README files - may contain important installation or license information

Readme files

Running with MPI

By default, Maker will only run on 1 cpu. If you want to parallelize on any number of cpus and nodes, you can enable MPI by setting the MAKER_MPI variable to 1 in the job destination, and setting GALAXY_SLOTS to the desired number of cores (see https://galaxyproject.org/admin/config/galaxy_slots/#galaxy_slots-for-server-admins).

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
genome annotation pipeline 2.31.11+galaxy2 16.04

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis