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Repository 'clustalw'
http://toolshed.g2.bx.psu.edu/view/fubar/clustalw/8888e4e3f169
clustalw
unrestricted
multiple sequence alignment program for DNA or proteins
Galaxy wrapper for the Clustalw multiple alignment program - aligns multiple DNA or protein sequences input as fasta using default parameters. Heavily modified from a script posted by Hans-Rudolf Hotz at http://lists.bx.psu.edu/pipermail/galaxy-dev/2010-November/003732.html

Sure there are plenty of good web implementations, but having it built in to Galaxy makes it even handier. If Fasta is chosen as the output format, the weblogo3 tool will create a very nice sequence logo of the multiple alignment.
0:8888e4e3f169
fubar
False
227

Categories
Assembly
Fasta Manipulation