Repository revision
2:0132036a530a

Repository 'concoct_cut_up_fasta'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/concoct_cut_up_fasta

CONCOCT: Cut up contigs tool metadata
Miscellaneous
in non-overlapping or overlapping parts of equal length
concoct_cut_up_fasta
toolshed.g2.bx.psu.edu/repos/iuc/concoct_cut_up_fasta/concoct_cut_up_fasta/1.1.0+galaxy0
1.1.0+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/concoct_cut_up_fasta/concoct_cut_up_fasta/1.1.0+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/concoct_cut_up_fasta/concoct_cut_up_fasta/1.1.0+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/concoct_cut_up_fasta/concoct_cut_up_fasta/1.0.0+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/concoct_cut_up_fasta/concoct_cut_up_fasta/1.0.0+galaxy0
concoct_cut_up_fasta
Requirements (dependencies defined in the <requirements> tag set)
name version type
concoct 1.1.0 package
Functional tests
name inputs outputs required files
Test-1 input_fasta: two_contigs.fa
chunk_size: 1000
overlap_size: 0
merge_last: False
bedfile: False
name: value
two_contigs.fa
value
Test-2 input_fasta: two_contigs.fa
chunk_size: 1000
overlap_size: 0
merge_last: True
bedfile: True
name: value
name: value
two_contigs.fa
value
Test-3 input_fasta: composition.fa.gz
chunk_size: 500
overlap_size: 499
merge_last: False
bedfile: False
name: value
composition.fa.gz
value