#import imp
  #set $general_functions=$imp.load_source('General_functions', $__tool_directory__+'/../../src/General_functions.py')
  ##change for Planemo test
  ##set $general_functions=$imp.load_source('General_functions', $__tool_directory__+'/src/General_functions.py')

  #if $inputCondition.selection == "CELcollection" and $inputCondition.selectCollectionStrat.how=="group_tags":
    #set $temp_factor_names = list()
    #for $factor in $inputCondition.selectCollectionStrat.factorListBis:
          #set $temp_factor = list()
          #for $level in $factor.valueList:
            #set $temp_level = ''
            #for $group in $level.valueConditions.value:
                #for $file in $inputCondition.inputData.get_datasets_for_group($group):
                    printf "$group\t $file.element_identifier\n" >> ./TAGmatching.csv;
                    #if $temp_level == '':
                      #set $temp_level = str($file.element_identifier)
                    #else:
                      #set $temp_level += ','+str($file.element_identifier)
                    #end if
                #end for
            #end for
            $temp_factor.append( {'valueName':str($level.valueName), 'valueConditions':$temp_level} )
          #end for
          $temp_factor.reverse()
          $temp_factor_names.append( {'factorName':str($factor.factorName), 'valueList':$temp_factor} )
    #end for
  #end if

  #if $inputCondition.selection == "CELcollection":
    #if $inputCondition.selectCollectionStrat.how=="group_tags":
      #set $ret_code=$general_functions.generateFactorFile($inputCondition.inputData.collection,$temp_factor_names,$outputData.file_name,$log.file_name)
    #else:
      #set $ret_code=$general_functions.generateFactorFile($inputCondition.inputData.collection,$inputCondition.selectCollectionStrat.factorListBis,$outputData.file_name,$log.file_name)
    #end if
  #else:
    #set $ret_code=$general_functions.generateFactorFile($inputCondition.inputData,$inputCondition.factorList,$outputData.file_name,$log.file_name)
  #end if

  if [ $ret_code != 0 ]; then
    printf "[ERROR]Error during factor file generation\n" >> $log;
    exit $ret_code;
  fi;

  printf "[INFO]End of tool script" >> $log;