Repository revision
1:589e4d51bda4

Repository 'hhsearch'
hg clone https://toolshed.g2.bx.psu.edu/repos/guerler/hhsearch

HHsearch tool metadata
Miscellaneous
HHsearch
detecting remote homologues of proteins
hhsearch
toolshed.g2.bx.psu.edu/repos/guerler/hhsearch/hhsearch/3.2.0+galaxy0
3.2.0+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/guerler/hhsearch/hhsearch/3.2.0+galaxy0 (this tool)
hhsearch
Requirements (dependencies defined in the <requirements> tag set)
name version type
hhsuite 3.2.0 package
Functional tests
name inputs outputs required files
Test-1 i: 6VYB_A.fasta
method: hhblits
db_source|ffdata: dbCAN-fam-V8/dbCAN-fam-V8_hhm.ffdata
db_source|ffindex: dbCAN-fam-V8/dbCAN-fam-V8_hhm.ffindex
db_source|db_source_selector: history
db_source_cs219|ffdata: dbCAN-fam-V8/dbCAN-fam-V8_cs219.ffdata
db_source_cs219|ffindex: dbCAN-fam-V8/dbCAN-fam-V8_cs219.ffindex
db_source_cs219|db_source_selector: history
name: value
6VYB_A.fasta
dbCAN-fam-V8/dbCAN-fam-V8_hhm.ffdata
dbCAN-fam-V8/dbCAN-fam-V8_hhm.ffindex
dbCAN-fam-V8/dbCAN-fam-V8_cs219.ffdata
dbCAN-fam-V8/dbCAN-fam-V8_cs219.ffindex
value
Test-2 i: 6VYB_A.fasta
method: hhblits
db_source|ffindex: hmm_dbcan
db_source|db_source_selector: indexed
db_source_cs219|ffindex: cs219_dbcan
db_source_cs219|db_source_selector: indexed
name: value
6VYB_A.fasta
value