Repository revision
1:640400ad260d

Repository 'checkm_lineage_set'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/checkm_lineage_set

CheckM lineage_set tool metadata
Miscellaneous
Infer lineage-specific marker sets for each bin
checkm_lineage_set
toolshed.g2.bx.psu.edu/repos/iuc/checkm_lineage_set/checkm_lineage_set/1.2.0+galaxy0
1.2.0+galaxy0
checkm
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/checkm_lineage_set/checkm_lineage_set/1.2.0+galaxy0 (this tool)
checkm_lineage_set
Requirements (dependencies defined in the <requirements> tag set)
name version type
checkm-genome 1.2.0 package
Functional tests
name inputs outputs required files
Test-1 phylo_hmm_info: phylo_hmm_info.pkl.gz
bin_stats_tree: bin_stats.tree.tsv
hmmer_tree: list collection
concatenated_tre: concatenated.tre
unique: 10
multi: 10
force_domain: False
no_refinement: False
name: value
phylo_hmm_info.pkl.gz
bin_stats.tree.tsv
hmmer.tree.txt
concatenated.tre
value