Repository revision
5:9a854107dbb2

Repository 'cuffnorm'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/cuffnorm

Cuffnorm tool metadata
Miscellaneous
Cuffnorm
Create normalized expression levels
cuffnorm
toolshed.g2.bx.psu.edu/repos/devteam/cuffnorm/cuffnorm/2.2.1.3
2.2.1.3
cuffnorm 2>&1 | head -n 1
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/cuffnorm/cuffnorm/2.2.1.3 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/cuffnorm/cuffnorm/2.2.1.2
toolshed.g2.bx.psu.edu/repos/devteam/cuffnorm/cuffnorm/2.2.1.1
toolshed.g2.bx.psu.edu/repos/devteam/cuffnorm/cuffnorm/2.2.1.0
cuffnorm
Requirements (dependencies defined in the <requirements> tag set)
name version type
cufflinks 2.2.1 package
Functional tests
name inputs outputs required files
Test-1 in_type|conditions_1|samples: cuffdiff_in2.sam
gtf_input: cuffcompare_out5.gtf
in_type|conditions_1|name: in2
in_type|conditions_0|samples: cuffdiff_in1.sam
in_type|set_in_type: BAM
in_type|conditions_0|name: in1
attributes: name
attributes: name
attributes: name
attributes: name
attributes: name
attributes: name
attributes: name
attributes: name
cuffcompare_out5.gtf
cuffdiff_in1.sam
cuffdiff_in2.sam
name