| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotdistvscounts/hicexplorer_hicplotdistvscounts/1.8.1.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotdistvscounts/hicexplorer_hicplotdistvscounts/1.8.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotdistvscounts/hicexplorer_hicplotdistvscounts/1.7.2.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotdistvscounts/hicexplorer_hicplotdistvscounts/1.7.1.0 |
| hicexplorer_hicplotdistvscounts |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| hicexplorer | 1.8 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
skipDiagonal: False matrices: small_test_matrix_50kb_res.h5 |
plotFile: hicPlotDistVsCounts_result1.png |
small_test_matrix_50kb_res.h5 hicPlotDistVsCounts_result1.png |
| Test-2 |
matrices: ['small_test_matrix_50kb_res.h5', 'small_test_matrix_50kb_res.h5'] chromosomeExclude_2|chromosomeExclude: chr3LHet chromosomeExclude_1|chromosomeExclude: chrM perchr: True chromosomeExclude_0|chromosomeExclude: chrUextra skipDiagonal: False |
plotFile: hicPlotDistVsCounts_result2.png |
small_test_matrix_50kb_res.h5 hicPlotDistVsCounts_result2.png |