| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/anndata_import/anndata_import/0.6.22.post1+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/anndata_import/anndata_import/0.6.22.post1+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/anndata_import/anndata_import/0.6.19+galaxy0 |
| anndata_import |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| anndata | 0.6.22.post1 | package |
| loompy | 2.0.17 | package |
| h5py | 2.9.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in|adata_format: loom in|sparse: True in|input: krumsiek11.loom in|cleanup: False in|obs_names: CellID in|var_names: Gene in|x_name: spliced |
attributes: name |
krumsiek11.loom name |
| Test-2 |
in|adata_format: tabular in|first_column_names: True in|input: adata.csv |
attributes: name |
adata.csv name |
| Test-3 |
in|adata_format: tabular in|first_column_names: True in|input: adata.tsv |
attributes: name |
adata.tsv name |
| Test-4 |
in|adata_format: umi_tools in|input: umi_tools.tsv |
attributes: name |
umi_tools.tsv name |