| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/yating-l/ucsc_blat/ucsc_blat/377+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/yating-l/ucsc_blat/ucsc_blat/1.2 (this tool) |
| toolshed.g2.bx.psu.edu/repos/yating-l/ucsc_blat/ucsc_blat/1.1 |
| toolshed.g2.bx.psu.edu/repos/yating-l/ucsc_blat/ucsc_blat/36 |
| toolshed.g2.bx.psu.edu/repos/yating-l/ucsc_blat/ucsc_blat/35-0 |
| toolshed.g2.bx.psu.edu/repos/yating-l/ucsc_blat/ucsc_blat/1.0 |
| ucsc_blat |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| ucsc_tools_340_for_BLAT | 1.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
reference_source|database: amaVit1_Gallus/amaVit1.fa reference_source|reference_source_selector: history query_type: rnax database_type: dnax noHead: yes mask_type|mask: lower query: amaVit1_Gallus/Gallus_gallus_RefSeq.fa |
attributes: name |
amaVit1_Gallus/amaVit1.fa amaVit1_Gallus/Gallus_gallus_RefSeq.fa name |
| Test-2 |
reference_source|database: dbia3/dbia3.fa reference_source|reference_source_selector: history query_type: rnax database_type: dnax noHead: yes mask_type|mask: lower query: dbia3/dmel-transcript.fa |
attributes: name |
dbia3/dbia3.fa dbia3/dmel-transcript.fa name |
| Test-3 |
reference_source|database: dbia3/dbia3_masked.2bit reference_source|reference_source_selector: history query_type: rnax database_type: dnax noHead: yes mask_type|mask: file.out mask_type|mask_file: dbia3/dbia3_RM.out query: dbia3/dmel-transcript.fa |
attributes: name |
dbia3/dbia3_masked.2bit dbia3/dmel-transcript.fa dbia3/dbia3_RM.out name |