| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/aldex2/aldex2/1.26.0+galaxy0 (this tool) |
| aldex2 |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| bioconductor-aldex2 | 1.26.0 | package |
| r-data.table | 1.14.2 | package |
| r-optparse | 1.7.1 | package |
| r-qgraph | 1.9.2 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 |
name: value |
reads.tabular value |
| Test-2 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 denom: zero |
name: value |
reads.tabular value |
| Test-3 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 analysis_type_cond|effect: False analysis_type_cond|include_sample_summary: True analysis_type_cond|iterate: True |
name: value |
reads.tabular value |
| Test-4 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 analysis_type_cond|aldex_test: kw |
name: value |
reads.tabular value |
| Test-5 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 analysis_type_cond|cont_var_0|group_num: 1 analysis_type_cond|cont_var_0|num_cols_in_group: 7 analysis_type_cond|cont_var_1|group_num: 2 analysis_type_cond|cont_var_1|num_cols_in_group: 7 analysis_type_cond|analysis_type: aldex_corr |
name: value |
reads.tabular value |
| Test-6 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 analysis_type_cond|analysis_type: aldex_effect |
name: value |
reads.tabular value |
| Test-7 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 analysis_type_cond|analysis_type: aldex_expected_distance |
name: value |
reads.tabular value |
| Test-8 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 analysis_type_cond|analysis_type: aldex_kw |
name: value |
reads.tabular value |
| Test-9 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 analysis_type_cond|analysis_type: aldex_plot |
name: value |
reads.tabular value |
| Test-10 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 analysis_type_cond|feature_name: A:D:A:E analysis_type_cond|analysis_type: aldex_plot_feature |
name: value |
reads.tabular value |
| Test-11 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 analysis_type_cond|analysis_type: aldex_ttest |
name: value |
reads.tabular value |
| Test-12 |
reads: reads.tabular conditions_0|group_name: NS conditions_0|num_cols: 7 conditions_1|group_name: S conditions_1|num_cols: 7 analysis_type_cond|paired_test: True analysis_type_cond|hist_plot: true analysis_type_cond|analysis_type: aldex_ttest |
name: value name: value |
reads.tabular value |