| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/nanopolish_polya/nanopolish_polya/0.11.1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/nanopolish_polya/nanopolish_polya/0.1.0 (this tool) |
| nanopolish_polya |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| nanopolish | 0.11.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
reference_source|reference_source_selector: history reference_source|ref_file: enolase_reference.fas input_merged: 30xpolyA-small-subset.fastq b: 30xpolyA-small-subset.sorted.bam input_reads_raw: fast5_files_30xpolyA-small-subset.tar.gz |
attributes: name |
30xpolyA-small-subset.fastq fast5_files_30xpolyA-small-subset.tar.gz 30xpolyA-small-subset.sorted.bam enolase_reference.fas name |
| Test-2 |
input_merged: 30xpolyA-small-subset.fastq input_reads_raw: fast5_files_30xpolyA-small-subset.tar.gz reference_source|reference_source_selector: history b: 30xpolyA-small-subset.sorted.bam w: YHR174W:600-900 reference_source|ref_file: enolase_reference.fas |
attributes: name |
30xpolyA-small-subset.fastq fast5_files_30xpolyA-small-subset.tar.gz 30xpolyA-small-subset.sorted.bam enolase_reference.fas name |
| Test-3 |
input_merged: 30xpolyA-small-subset.fastq input_reads_raw: fast5_files_30xpolyA-small-subset.tar reference_source|reference_source_selector: history b: 30xpolyA-small-subset.sorted.bam w: YHR174W:600-900 reference_source|ref_file: enolase_reference.fas |
attributes: name |
30xpolyA-small-subset.fastq fast5_files_30xpolyA-small-subset.tar 30xpolyA-small-subset.sorted.bam enolase_reference.fas name |