Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/computational-metabolomics/mspurity_createdatabase/mspurity_createdatabase/1.16.2+galaxy0 |
toolshed.g2.bx.psu.edu/repos/computational-metabolomics/mspurity_createdatabase/mspurity_createdatabase/1.12.2+galaxy3 (this tool) |
toolshed.g2.bx.psu.edu/repos/computational-metabolomics/mspurity_createdatabase/mspurity_createdatabase/1.12.2+galaxy2 |
toolshed.g2.bx.psu.edu/repos/computational-metabolomics/mspurity_createdatabase/mspurity_createdatabase/1.12.2+galaxy1 |
toolshed.g2.bx.psu.edu/repos/computational-metabolomics/mspurity_createdatabase/mspurity_createdatabase/1.12.2+galaxy0 |
toolshed.g2.bx.psu.edu/repos/computational-metabolomics/mspurity_createdatabase/mspurity_createdatabase/1.12.0+galaxy1 |
toolshed.g2.bx.psu.edu/repos/computational-metabolomics/mspurity_createdatabase/mspurity_createdatabase/1.12.0+galaxy0 |
mspurity_createdatabase |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
bioconductor-mspurity | 1.12.2 | package |
bioconductor-camera | 1.42.0 | package |
bioconductor-xcms | 3.8.0 | package |
bioconductor-mspuritydata | 1.14.0 | package |
r-optparse | 1.6.4 | package |
r-rpostgres | 1.1.1 | package |
r-rmysql | 0.10.17 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
xset_xa: xset_group_LCMS_1_LCMS_2_LCMSMS_1_LCMSMS_2.RData camera_xcms: xcms pa: averageFragSpectra_output_all.RData file_load_conditional|input: list collection file_load_conditional|file_load_select: yes |
name: value |
xset_group_LCMS_1_LCMS_2_LCMSMS_1_LCMSMS_2.RData averageFragSpectra_output_all.RData LCMS_1.mzML LCMS_2.mzML LCMSMS_1.mzML LCMSMS_2.mzML value |
Test-2 |
xset_xa: xset_group_LCMS_1_LCMS_2_LCMSMS_1_LCMSMS_2.RData camera_xcms: xcms pa: averageFragSpectra_output_all.RData eic: True file_load_conditional|input: list collection file_load_conditional|file_load_select: yes |
name: value |
xset_group_LCMS_1_LCMS_2_LCMSMS_1_LCMSMS_2.RData averageFragSpectra_output_all.RData LCMS_1.mzML LCMS_2.mzML LCMSMS_1.mzML LCMSMS_2.mzML value |