| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/vandelj/giant_gsea_format/giant_gsea_format/0.2.0 (this tool) |
| giant_gsea_format |
| Requirements (dependencies defined in the <requirements> tag set) |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
mainCondition|expressionData: ./NormalizedData.tabular mainCondition|conditionInformation: ./FactorFileGenerator/output/conditionsFile.csv mainCondition|factorToInclude: Treatment mainCondition|selection: classicGSEA |
name: value name: value name: value |
./NormalizedData.tabular ./FactorFileGenerator/output/conditionsFile.csv value |
| Test-2 |
mainCondition|differentialAnalysis: ./DiffExprLimma/output/outputStat.csv mainCondition|comparisonsToUse: TreatVsControl mainCondition|rankingIndice: absFC mainCondition|pvalThreshold: 0.05 mainCondition|selection: rankedGSEA |
name: value name: value |
./DiffExprLimma/output/outputStat.csv value |