| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/peterjc/effectivet3/effectiveT3/0.0.21 (this tool) |
| toolshed.g2.bx.psu.edu/repos/peterjc/effectivet3/effectiveT3/0.0.20 |
| toolshed.g2.bx.psu.edu/repos/peterjc/effectivet3/effectiveT3/0.0.18 |
| toolshed.g2.bx.psu.edu/repos/peterjc/effectivet3/effectiveT3/0.0.17 |
| toolshed.g2.bx.psu.edu/repos/peterjc/effectivet3/effectiveT3/0.0.16 |
| toolshed.g2.bx.psu.edu/repos/peterjc/effectivet3/effectiveT3/0.0.15 |
| toolshed.g2.bx.psu.edu/repos/peterjc/effectivet3/effectiveT3/0.0.13 |
| toolshed.g2.bx.psu.edu/repos/peterjc/effectivet3/effectiveT3/0.0.12 |
| toolshed.g2.bx.psu.edu/repos/peterjc/effectivet3/effectiveT3/0.0.11 |
| toolshed.g2.bx.psu.edu/repos/peterjc/effectivet3/effectiveT3/0.0.10 |
| toolshed.g2.bx.psu.edu/repos/peterjc/effectivet3/effectiveT3/0.0.8 |
| effectiveT3 |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| effectiveT3 | 1.0.1 | package |
| Additional information about this tool |
python $__tool_directory__/effectiveT3.py '$module.fields.path'
#if $restrict.type=="cutoff":
'cutoff=$restrict.cutoff'
#else:
'$restrict.type'
#end if
'$fasta_file' '$tabular_file'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
fasta_file: four_human_proteins.fasta module: animal restrict|type: selective |
name: value |
four_human_proteins.fasta value |
| Test-2 |
fasta_file: four_human_proteins.fasta module: std_2_0_2 restrict|cutoff: 0.8 restrict|type: cutoff |
name: value |
four_human_proteins.fasta value |
| Test-3 |
fasta_file: empty.fasta module: plant restrict|type: sensitive |
name: value |
empty.fasta value |