Repository revision
23:e1996f0f4e85

Repository 'tmhmm_and_signalp'
hg clone https://toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp

TMHMM 2.0 tool metadata
Miscellaneous
TMHMM 2.0
Find transmembrane domains in protein sequences
tmhmm2
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.17
0.0.17
python $__tool_directory__/tmhmm2.py --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.17 (this tool)
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.1
tmhmm2
Requirements (dependencies defined in the <requirements> tag set)
name version type
tmhmm2 not provided package
Additional information about this tool
python $__tool_directory__/tmhmm2.py "\$GALAXY_SLOTS" '$fasta_file' '$tabular_file'
    
None
False
Parallelism
basic
fasta_file
to_size
2000
tabular_file
Functional tests
name inputs outputs required files
Test-1 fasta_file: four_human_proteins.fasta
name: value
four_human_proteins.fasta
value
Test-2 fasta_file: empty.fasta
name: value
empty.fasta
value