| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/rxlr_motifs/0.0.7 (this tool) |
| toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/rxlr_motifs/0.0.6 |
| toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/rxlr_motifs/0.0.5 |
| rxlr_motifs |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| signalp | not provided | binary |
| hmmsearch | not provided | binary |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
fasta_file: rxlr_win_et_al_2007.fasta model: Win2007 |
tabular_file: rxlr_win_et_al_2007.tabular |
rxlr_win_et_al_2007.fasta rxlr_win_et_al_2007.tabular |
| Test-2 |
fasta_file: empty.fasta model: Bhattacharjee2006 |
tabular_file: empty_rxlr.Bhattacharjee2006.tabular |
empty.fasta empty_rxlr.Bhattacharjee2006.tabular |
| Test-3 |
fasta_file: empty.fasta model: Win2007 |
tabular_file: empty_rxlr.Win2007.tabular |
empty.fasta empty_rxlr.Win2007.tabular |
| Test-4 |
fasta_file: empty.fasta model: Whisson2007 |
tabular_file: empty_rxlr.Whisson2007.tabular |
empty.fasta empty_rxlr.Whisson2007.tabular |