Repository revision
16:7de64c8b258d

Repository 'tmhmm_and_signalp'
hg clone https://toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp

SignalP 3.0 tool metadata
Miscellaneous
SignalP 3.0
Find signal peptides in protein sequences
signalp3
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/signalp3/0.0.12
0.0.12
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/signalp3/0.0.12 (this tool)
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/signalp3/0.0.11
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/signalp3/0.0.10
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/signalp3/0.0.9
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/signalp3/0.0.8
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/signalp3/0.0.7
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/signalp3/0.0.6
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/signalp3/0.0.3
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/signalp3/0.0.1
signalp3
Requirements (dependencies defined in the <requirements> tag set)
name version type
signalp not provided binary
Functional tests
name inputs outputs required files
Test-1 fasta_file: four_human_proteins.fasta
organism: euk
truncate: 0
tabular_file: four_human_proteins.signalp3.tabular
four_human_proteins.fasta
four_human_proteins.signalp3.tabular
Test-2 fasta_file: empty.fasta
organism: euk
truncate: 60
tabular_file: empty_signalp3.tabular
empty.fasta
empty_signalp3.tabular
Test-3 fasta_file: empty.fasta
organism: gram+
truncate: 80
tabular_file: empty_signalp3.tabular
empty.fasta
empty_signalp3.tabular
Test-4 fasta_file: empty.fasta
organism: gram-
truncate: 0
tabular_file: empty_signalp3.tabular
empty.fasta
empty_signalp3.tabular
Test-5 fasta_file: rxlr_win_et_al_2007.fasta
organism: euk
truncate: 70
tabular_file: rxlr_win_et_al_2007_sp3.tabular
rxlr_win_et_al_2007.fasta
rxlr_win_et_al_2007_sp3.tabular