Repository revision
16:7de64c8b258d

Repository 'tmhmm_and_signalp'
hg clone https://toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp

TMHMM 2.0 tool metadata
Miscellaneous
TMHMM 2.0
Find transmembrane domains in protein sequences
tmhmm2
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.11
0.0.11
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.13
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.11 (this tool)
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.10
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.9
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.8
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.7
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.6
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.5
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.3
toolshed.g2.bx.psu.edu/repos/peterjc/tmhmm_and_signalp/tmhmm2/0.0.1
tmhmm2
Requirements (dependencies defined in the <requirements> tag set)
name version type
tmhmm not provided binary
Functional tests
name inputs outputs required files
Test-1 fasta_file: four_human_proteins.fasta
tabular_file: four_human_proteins.tmhmm2.tabular
four_human_proteins.fasta
four_human_proteins.tmhmm2.tabular
Test-2 fasta_file: empty.fasta
tabular_file: empty_tmhmm2.tabular
empty.fasta
empty_tmhmm2.tabular