Repository revision
16:ce4ce3316f74

Repository 'deeptools_plot_enrichment'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment

plotEnrichment tool metadata
Miscellaneous
plots read/fragment coverage over sets of regions
deeptools_plot_enrichment
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/3.2.1.0.0
3.2.1.0.0
plotEnrichment --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/3.3.0.0.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/3.2.1.0.0 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/3.2.0.0.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/3.1.2.0.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/3.1.0.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/3.0.2.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/3.0.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/3.0.0.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/2.5.7.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/2.5.1.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/2.5.1.0.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/2.5.0.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/2.4.2.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/2.4.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/2.3.6.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_enrichment/deeptools_plot_enrichment/2.3.5.0
deeptools_plot_enrichment
Requirements (dependencies defined in the <requirements> tag set)
name version type
deeptools 3.2.1 package
samtools 1.9 package
Functional tests
name inputs outputs required files
Test-1 advancedOpt|minMappingQuality: 0
advancedOpt|showAdvancedOpt: yes
multibam_conditional|bamfiles: ['bowtie2 test1.bam', 'bowtie2 test1.bam']
BED: ['multiBamSummary_regions.bed', 'multiBamSummary_regions.bed']
advancedOpt|regionLabels: up down
outRawCounts: True
attributes: name
attributes: name
bowtie2 test1.bam
multiBamSummary_regions.bed
name