Repository revision
0:1d373f219445

Repository 'fastqc'
hg clone http://toolshed.g2.bx.psu.edu/repos/jjohnson/fastqc

FastQC tool metadata
Miscellaneous
FastQC
quality control checks on raw sequence data
FastQC
toolshed.g2.bx.psu.edu/repos/jjohnson/fastqc/FastQC/1.0.0
1.0.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/jjohnson/fastqc/FastQC/1.0.0 (this tool)
FastQC
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Additional information about this tool
fastqc.py
   #if $input.extension.startswith( "fastq"):
    --format=fastq
   #else
    --format=$input.extension
   #end if
   --input='$input'
   --name='$input.name'
   --dir='$report.extra_files_path'
   --report='$report'
   #if $contaminants != None and $contaminants != "None" and $contaminants != "":
     --contaminants=$contaminants 
   #end if
  
python
False
False
Functional tests
No functional tests defined