Repository revision
39:e56023008e36

Repository 'genome_diversity'
hg clone https://toolshed.g2.bx.psu.edu/repos/miller-lab/genome_diversity

gd_snp to VCF tool metadata
Miscellaneous
: Convert from gd_snp or gd_genotype to VCF format, for submission to dbSNP
gd_gd_snp2vcf
toolshed.g2.bx.psu.edu/repos/miller-lab/genome_diversity/gd_gd_snp2vcf/1.1.0
1.1.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/miller-lab/genome_diversity/gd_gd_snp2vcf/1.1.0 (this tool)
gd_gd_snp2vcf
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 individuals|geno: 11
batch: Test1
individuals|choice: 2
input: sample.gd_snp
hand: MyHandle
ref: pb_000001.1
output: snpsForSubmission.vcf
output2: snpsForSubmission.text
sample.gd_snp
snpsForSubmission.vcf
snpsForSubmission.text