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Sort.seqs tool metadata

Miscellaneous

Name: Sort.seqs

Description: put sequences in different files in the same order

Id: mothur_sort_seqs

Guid: toolshed.g2.bx.psu.edu/repos/iuc/mothur_sort_seqs/mothur_sort_seqs/1.36.1.0

Version: 1.36.1.0

Version command string: mothur "#help()" | sed '7q;d' | cut -d" " -f2

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/iuc/mothur_sort_seqs/mothur_sort_seqs/1.39.5.0

toolshed.g2.bx.psu.edu/repos/iuc/mothur_sort_seqs/mothur_sort_seqs/1.36.1.0 (this tool)

mothur_sort_seqs

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

mothur

1.36.1

package

Functional tests

name

inputs

outputs

required files

Test-1

fasta_in: amazon.fasta

fasta_out: None
logfile: None

amazon.fasta

Test-2

qfile_in: Mock_S280_L001_R1_001_small.trim.contigs.qual

qfile_out: None
logfile: None

Mock_S280_L001_R1_001_small.trim.contigs.qual

Test-3

group_in: amazon.groups

group_out: None
logfile: None

amazon.groups

Test-4

count: amazon.count_table
fasta_in: amazon.fasta

fasta_out: None
logfile: None

amazon.fasta
amazon.count_table

Test-5

group_in: amazon.groups
fasta_in: amazon.fasta
qfile_in: Mock_S280_L001_R1_001_small.trim.contigs.qual

fasta_out: None
qfile_out: None
group_out: None
logfile: None

amazon.fasta
Mock_S280_L001_R1_001_small.trim.contigs.qual
amazon.groups