Repository revision
9:ac1304435181

Repository 'deeptools_plot_profile'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_profile

plotProfile tool metadata
Miscellaneous
plotProfile
creates a profile plot for score distributions across genomic regions
deeptools_plot_profile
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_profile/deeptools_plot_profile/2.3.6.0
2.3.6.0
plotProfile --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_profile/deeptools_plot_profile/2.4.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_profile/deeptools_plot_profile/2.3.6.0 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_profile/deeptools_plot_profile/2.3.5.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_profile/deeptools_plot_profile/2.2.3.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_profile/deeptools_plot_profile/2.2.2.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_profile/deeptools_plot_profile/2.1.0.0
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_plot_profile/deeptools_plot_profile/2.0.1.0
deeptools_plot_profile
Requirements (dependencies defined in the <requirements> tag set)
name version type
python 2.7.10 package
deepTools 2.3.6 package
Functional tests
name inputs outputs required files
Test-1 matrixFile: computeMatrix_result1.gz
outFileName: profiler_result1.png
computeMatrix_result1.gz
profiler_result1.png
Test-2 scaleRegions|showScaleRegionsOpt: yes
advancedOpt|outFileNameData: True
advancedOpt|showAdvancedOpt: yes
matrixFile: computeMatrix_result1.gz
outFileName: profiler_result2.png
output_outFileNameData: profiler_result2.tabular
computeMatrix_result1.gz
profiler_result2.png
profiler_result2.tabular