Repository revision
2:c09a20532957

Repository 'bam_to_sam'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam

BAM-to-SAM tool metadata
Miscellaneous
BAM-to-SAM
converts BAM format to SAM format
bam_to_sam
toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam/bam_to_sam/1.0.4
1.0.4
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam/bam_to_sam/1.0.6
toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam/bam_to_sam/1.0.4 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/bam_to_sam/bam_to_sam/1.0.3
bam_to_sam
Requirements (dependencies defined in the <requirements> tag set)
name version type
samtools 0.1.19 package
Functional tests
name inputs outputs required files
Test-1 header: False
input1: bam_to_sam_in1.bam
output1: bam_to_sam_out1.sam
bam_to_sam_in1.bam
bam_to_sam_out1.sam
Test-2 header: False
input1: bam_to_sam_in2.bam
output1: bam_to_sam_out2.sam
bam_to_sam_in2.bam
bam_to_sam_out2.sam
Test-3 header: True
input1: bam_to_sam_in1.bam
output1: bam_to_sam_out3.sam
bam_to_sam_in1.bam
bam_to_sam_out3.sam