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Repository revision

Revision: 3:e0041942a12d

Repository 'fastq_filter_by_id'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/peterjc/fastq_filter_by_id

Filter FASTQ by ID tool metadata

Miscellaneous

Name: Filter FASTQ by ID

Description: from a tabular file

Id: fastq_filter_by_id

Guid: toolshed.g2.bx.psu.edu/repos/peterjc/fastq_filter_by_id/fastq_filter_by_id/0.0.5

Version: 0.0.5

Version command string: python /srv/toolshed/main/var/data/repos/000/repo_17/tools/fastq_filter_by_id/fastq_filter_by_id.py --version

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/peterjc/fastq_filter_by_id/fastq_filter_by_id/0.0.5 (this tool)

toolshed.g2.bx.psu.edu/repos/peterjc/fastq_filter_by_id/fastq_filter_by_id/0.0.4

toolshed.g2.bx.psu.edu/repos/peterjc/fastq_filter_by_id/fastq_filter_by_id/0.0.3

toolshed.g2.bx.psu.edu/repos/peterjc/fastq_filter_by_id/fastq_filter_by_id/0.0.2

fastq_filter_by_id

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

galaxy_sequence_utils

1.0.1

package

Functional tests

name

inputs

outputs

required files

Test-1

input_fastq: sanger-pairs-mixed.fastq
output_choice_cond|output_choice: both
columns: 1
input_tabular: sanger-pairs-names.tabular

output_pos: empty_file.dat
output_neg: sanger-pairs-mixed.fastq

sanger-pairs-mixed.fastq
sanger-pairs-names.tabular
empty_file.dat