Repository revision
14:eaee459f3d69

Repository 'prokka'
hg clone https://toolshed.g2.bx.psu.edu/repos/crs4/prokka

Prokka tool metadata
Miscellaneous
Prokka
Prokaryotic genome annotation
prokka
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.13
1.13
prokka --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.13+galaxy1
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.13 (this tool)
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.12.0
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.11.1
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.11.0
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.4.0
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.3.0
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.2.0
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.1.0
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.0.1
toolshed.g2.bx.psu.edu/repos/crs4/prokka/prokka/1.0.0
prokka
Requirements (dependencies defined in the <requirements> tag set)
name version type
prokka 1.13 package
Functional tests
name inputs outputs required files
Test-1 input: phiX174.fasta
outputs: ['gff', 'gbk', 'fna', 'faa', 'ffn', 'sqn', 'fsa', 'tbl', 'tsv', 'err', 'txt']
out_gff: out.gff
out_gbk: out.gbk
out_fna: out.fna
out_faa: out.faa
out_ffn: out.ffn
out_sqn: out.sqn
out_fsa: out.fsa
out_tbl: out.tbl
out_tsv: out.tsv
out_err: out.err
out_txt: out.txt
out_log: None
phiX174.fasta
out.gff
out.gbk
out.fna
out.faa
out.ffn
out.sqn
out.fsa
out.tbl
out.tsv
out.err
out.txt