Repository revision
5:db17d5321bad

Repository 'samtools_flagstat'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat

Samtools flagstat tool metadata
Miscellaneous
tabulate descriptive stats for BAM datset
samtools_flagstat
toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/2.0.2
2.0.2
samtools 2>&1 | grep Version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/2.0.3
toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/2.0.2 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/2.0.1
toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/2.0
toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.1
toolshed.g2.bx.psu.edu/repos/devteam/samtools_flagstat/samtools_flagstat/1.0.0
samtools_flagstat
Requirements (dependencies defined in the <requirements> tag set)
name version type
samtools 1.9 package
Functional tests
name inputs outputs required files
Test-1 input1: samtools_flagstat_input1.bam
attributes: name
samtools_flagstat_input1.bam
name