Repository revision
2:c2a356708570

Repository 'sharplabtool'
hg clone https://toolshed.g2.bx.psu.edu/repos/xuebing/sharplabtool

FASTQ de-interlacer tool metadata
Miscellaneous
FASTQ de-interlacer
on paired end reads
fastq_paired_end_deinterlacer
toolshed.g2.bx.psu.edu/repos/xuebing/sharplabtool/fastq_paired_end_deinterlacer/1.1
1.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/xuebing/sharplabtool/fastq_paired_end_deinterlacer/1.1 (this tool)
fastq_paired_end_deinterlacer
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 input_file: paired_end_merged.fastqsanger
 output1_pairs_file: paired_end_1.fastqsanger
output2_pairs_file: paired_end_2.fastqsanger
output1_singles_file: paired_end_1_singles.fastqsanger
output2_singles_file: paired_end_2_singles.fastqsanger
 paired_end_merged.fastqsanger
paired_end_1.fastqsanger
paired_end_2.fastqsanger
paired_end_1_singles.fastqsanger
paired_end_2_singles.fastqsanger
Test-2 input_file: paired_end_merged_errors.fastqsanger
 output1_pairs_file: paired_end_1_cleaned.fastqsanger
output2_pairs_file: paired_end_2_cleaned.fastqsanger
output1_singles_file: paired_end_1_cleaned_singles.fastqsanger
output2_singles_file: paired_end_2_cleaned_singles.fastqsanger
 paired_end_merged_errors.fastqsanger
paired_end_1_cleaned.fastqsanger
paired_end_2_cleaned.fastqsanger
paired_end_1_cleaned_singles.fastqsanger
paired_end_2_cleaned_singles.fastqsanger