| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/xuebing/sharplabtool/fastq_trimmer/1.0.0 (this tool) |
| fastq_trimmer |
| Requirements (dependencies defined in the <requirements> tag set) |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_file: sanger_full_range_original_sanger.fastqsanger base_offset_type: offsets_absolute left_column_offset: 0 right_column_offset: 0 keep_zero_length: keep_zero_length |
output_file: sanger_full_range_original_sanger.fastqsanger |
sanger_full_range_original_sanger.fastqsanger |
| Test-2 |
input_file: sanger_full_range_original_sanger.fastqsanger base_offset_type: offsets_absolute left_column_offset: 30 right_column_offset: 64 keep_zero_length: exclude_zero_length |
output_file: empty_file.dat |
sanger_full_range_original_sanger.fastqsanger empty_file.dat |
| Test-3 |
input_file: sanger_full_range_original_sanger.fastqsanger base_offset_type: offsets_percent left_column_offset: 50 right_column_offset: 50 keep_zero_length: exclude_zero_length |
output_file: empty_file.dat |
sanger_full_range_original_sanger.fastqsanger empty_file.dat |
| Test-4 |
input_file: sanger_full_range_original_sanger.fastqsanger base_offset_type: offsets_absolute left_column_offset: 45 right_column_offset: 45 keep_zero_length: exclude_zero_length |
output_file: fastq_trimmer_out1.fastqsanger |
sanger_full_range_original_sanger.fastqsanger fastq_trimmer_out1.fastqsanger |
| Test-5 |
input_file: sanger_full_range_original_sanger.fastqsanger base_offset_type: offsets_percent left_column_offset: 47.87 right_column_offset: 47.87 keep_zero_length: exclude_zero_length |
output_file: fastq_trimmer_out1.fastqsanger |
sanger_full_range_original_sanger.fastqsanger fastq_trimmer_out1.fastqsanger |