Repository revision
2:c2a356708570

Repository 'sharplabtool'
hg clone https://toolshed.g2.bx.psu.edu/repos/xuebing/sharplabtool

Call SNPS with Freebayes tool metadata
Miscellaneous
Bayesian genetic variant detector
freebayes_wrapper
toolshed.g2.bx.psu.edu/repos/xuebing/sharplabtool/freebayes_wrapper/0.5.0
0.5.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/xuebing/sharplabtool/freebayes_wrapper/0.5.0 (this tool)
freebayes_wrapper
Requirements (dependencies defined in the <requirements> tag set)
name version type
freebayes not provided package
Functional tests
name inputs outputs required files
Test-1 reference: mosaik_test_ref.fasta
bamfile: freebayes_in.bam
source_select: pre_set
output: freebayes_out.vcf
mosaik_test_ref.fasta
freebayes_in.bam
freebayes_out.vcf